Description : pre-mRNA-processing protein *(PRP39)
Gene families : OG_42_0002928 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002928_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G045860.9 | |
| Cluster | HCAA Clusters: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g04080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g35037 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| LOC_Os03g11200 | No alias | pre-mRNA-processing factor 39, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Seita.9G495800.1 | No alias | pre-mRNA-processing protein *(PRP39) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0004363 | glutathione synthase activity | IEP | Predicted GO |
| MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
| BP | GO:0006750 | glutathione biosynthetic process | IEP | Predicted GO |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0030975 | thiamine binding | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |
