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  5. At2g47110

At2g47110


Description : UBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g47110
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
101548 No alias ubiquitin 5 0.03 Orthogroups_2024-Update
19615 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g68940 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.03 Orthogroups_2024-Update
Bradi2g12280 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
Bradi2g34750 No alias Ribosomal protein S27a / Ubiquitin family protein 0.04 Orthogroups_2024-Update
Bradi4g38540 No alias ubiquitin extension protein 1 0.04 Orthogroups_2024-Update
Brara.E00858.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G00981.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre01.g007051 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.06 Orthogroups_2024-Update
Cre06.g273600 No alias Ribosomal protein S27a / Ubiquitin family protein 0.05 Orthogroups_2024-Update
GRMZM2G006293 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
GRMZM2G047732 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
Glyma.02G036000 No alias Ribosomal protein S27a / Ubiquitin family protein 0.04 Orthogroups_2024-Update
Glyma.09G023700 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
Glyma.19G195500 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.03 Orthogroups_2024-Update
HORVU1Hr1G023660.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Kfl00345_0130 kfl00345_0130_v1.... (at3g52590 : 254.0) Ubiquitin extension protein;... 0.07 Orthogroups_2024-Update
MA_13101g0020 No alias (at3g52590 : 257.0) Ubiquitin extension protein;... 0.02 Orthogroups_2024-Update
MA_529552g0010 No alias (at3g62250 : 229.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
MA_53043g0010 No alias (at1g31340 : 234.0) Encodes a ubiquitin-related protein... 0.03 Orthogroups_2024-Update
Mp7g14690.1 No alias component RPS27a of SSU proteome 0.03 Orthogroups_2024-Update
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.06 Orthogroups_2024-Update
Potri.001G025300 No alias ubiquitin 6 0.03 Orthogroups_2024-Update
Potri.014G115100 No alias ubiquitin 6 0.03 Orthogroups_2024-Update
Pp1s13_40V6 No alias ubiquitin extension protein 0.03 Orthogroups_2024-Update
Pp1s268_35V6 No alias ubiquitin fusion protein 0.03 Orthogroups_2024-Update
Pp1s56_52V6 No alias ubiquitin extension protein 0.04 Orthogroups_2024-Update
Seita.9G478400.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G135200.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc01g056940 No alias Ubiquitin 0.04 Orthogroups_2024-Update
Solyc01g096290 No alias ubiquitin-ribosomal fusion protein 0.04 Orthogroups_2024-Update
Solyc12g099030 No alias Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) 0.04 Orthogroups_2024-Update
Sopen01g029970 No alias Ubiquitin family 0.05 Orthogroups_2024-Update
Sopen08g004410 No alias Ubiquitin family 0.04 Orthogroups_2024-Update
Sopen08g031340 No alias Ubiquitin family 0.04 Orthogroups_2024-Update
Sopen12g033690 No alias Ubiquitin family 0.03 Orthogroups_2024-Update
Sopen12g033760 No alias Ubiquitin family 0.03 Orthogroups_2024-Update
evm.model.contig_2055.11 No alias (at3g52590 : 241.0) Ubiquitin extension protein;... 0.04 Orthogroups_2024-Update
evm.model.contig_3445.1 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
evm.model.tig00022075.50 No alias (at3g52590 : 236.0) Ubiquitin extension protein;... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002906 Ribosomal_S27a 102 147
IPR000626 Ubiquitin_dom 3 74
No external refs found!