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Description : RING/U-box superfamily protein (AHRD V3.3 *** AT1G47570.1)
Gene families : OG_42_0008619 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc03g078230 | |
| Cluster | HCCA clusters: Cluster_232 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sopen03g020950 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Predicted GO |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| BP | GO:0006470 | protein dephosphorylation | IEP | Predicted GO |
| MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| CC | GO:0016459 | myosin complex | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
| MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
| BP | GO:0036260 | RNA capping | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Predicted GO |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070568 | guanylyltransferase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 132 | 178 |
| No external refs found! |