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  5. HORVU2Hr1G053340.3

HORVU2Hr1G053340.3


Description : endoribonuclease *(CSP41)


Gene families : OG_42_0003865 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G053340.3
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi4g08030 No alias chloroplast RNA binding 0.05 Orthogroups_2024-Update
Cre10.g435800 No alias chloroplast RNA binding 0.02 Orthogroups_2024-Update
Glyma.03G230000 No alias chloroplast RNA binding 0.02 Orthogroups_2024-Update
MA_196108g0010 No alias (at1g09340 : 139.0) Encodes CHLOROPLAST RNA BINDING... 0.05 Orthogroups_2024-Update
Mp1g11680.1 No alias endoribonuclease (CSP41) 0.02 Orthogroups_2024-Update
Potri.013G006100 No alias chloroplast RNA binding 0.04 Orthogroups_2024-Update
Pp1s71_283V6 No alias nad-dependent epimerase dehydratase 0.03 Orthogroups_2024-Update
Seita.3G304400.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Solyc06g073260 No alias chloroplast RNA binding protein (AHRD V3.3 *** AT1G09340.1) 0.02 Orthogroups_2024-Update
evm.model.tig00021720.14 No alias (at1g09340 : 242.0) Encodes CHLOROPLAST RNA BINDING... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!