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At2g47310


Description : At2g47310 [Source:UniProtKB/TrEMBL;Acc:Q6AWW6]


Gene families : OG_42_0001337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001337_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g47310
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Brara.C02357.1 No alias transcription factor *(FCA/SSF) 0.04 Orthogroups_2024-Update
PSME_00020560-RA No alias (at4g16280 : 284.0) Flowering time control protein... 0.04 Orthogroups_2024-Update
evm.model.contig_3476.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001202 WW_dom 406 432
IPR000504 RRM_dom 209 275
IPR000504 RRM_dom 112 177
No external refs found!