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  5. HORVU2Hr1G061710.11

HORVU2Hr1G061710.11


Description : ubiquitin-binding adaptor *(UFD3)


Gene families : OG_42_0005730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G061710.11
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G061780.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0030674 protein binding, bridging IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0051015 actin filament binding IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015155 PFU 375 484
IPR013535 PUL_dom 522 705
IPR001680 WD40_repeat 48 79
IPR001680 WD40_repeat 180 212
IPR001680 WD40_repeat 215 250
IPR001680 WD40_repeat 254 291
IPR001680 WD40_repeat 140 172
IPR001680 WD40_repeat 295 328
No external refs found!