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Description : RNA editing factor *(ELI1)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G063300.4 | |
| Cluster | HCAA Clusters: Cluster_192 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 111767 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g20570 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g68870 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi5g01440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.A02032.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F01963.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.F02153.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
| Brara.G00509.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G201800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G033300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G061600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.20G163300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G063370.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G061610.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| LOC_Os07g15570 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| PSME_00025402-RA | No alias | (at3g02010 : 629.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00046266-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| Potri.004G043400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G215500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.007G068600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.007G146800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.008G052200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.013G006700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.016G065500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G334200.1 | No alias | RNA editing factor *(CLB19) | 0.05 | Orthogroups_2024-Update | |
| Solyc03g096610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc03g119950 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g052200 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen03g016890 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 136 | 164 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 131 |
| IPR002885 | Pentatricopeptide_repeat | 341 | 363 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 261 |
| IPR002885 | Pentatricopeptide_repeat | 266 | 314 |
| IPR002885 | Pentatricopeptide_repeat | 165 | 212 |
| IPR032867 | DYW_dom | 482 | 574 |
| No external refs found! |