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  5. HORVU2Hr1G063550.3

HORVU2Hr1G063550.3


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G063550.3
Cluster HCAA Clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
Bradi4g16767 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.04G193200 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.06G229800 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Glyma.20G132100 No alias FRS (FAR1 Related Sequences) transcription factor family 0.02 Orthogroups_2024-Update
HORVU1Hr1G061370.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
HORVU4Hr1G020290.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G044340.2 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g71850 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g06820 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g34590 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08370 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g40310 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g14040 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g32140 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.006G020700 No alias far-red elongated hypocotyls 3 0.02 Orthogroups_2024-Update
Potri.009G170100 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Sopen03g040440 No alias FAR1 DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 55 138
IPR007527 Znf_SWIM 375 399
No external refs found!