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  5. HORVU2Hr1G066910.1

HORVU2Hr1G066910.1


Description : assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly


Gene families : OG_42_0003831 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003831_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G066910.1
Cluster HCAA Clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
443685 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g05650 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os04g26841 No alias importin-8, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434007g0010 No alias (at2g31660 : 1252.0) SAD2 (super sensitive to ABA and... 0.03 Orthogroups_2024-Update
Pp1s203_56V6 No alias T9H9.18; importin beta-2 subunit family protein... 0.03 Orthogroups_2024-Update
evm.model.tig00000217.11 No alias (at3g59020 : 672.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
CC GO:0070939 Dsl1/NZR complex IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!