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  5. At2g47810

At2g47810


Description : NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0]


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g47810
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
At1g21970 No alias Nuclear transcription factor Y subunit B-9... 0.06 Orthogroups_2024-Update
At2g13570 No alias Uncharacterized protein At2g13570 (Fragment)... 0.04 Orthogroups_2024-Update
At3g53340 No alias Nuclear transcription factor Y subunit B-10... 0.04 Orthogroups_2024-Update
At5g47640 No alias Nuclear transcription factor Y subunit B-2... 0.03 Orthogroups_2024-Update
Brara.E00012.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
GRMZM5G804893 No alias nuclear factor Y, subunit B8 0.02 Orthogroups_2024-Update
Glyma.15G118800 No alias nuclear factor Y, subunit B3 0.02 Orthogroups_2024-Update
LOC_Os07g41580 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
Potri.013G019600 No alias nuclear factor Y, subunit B5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 55 119
No external refs found!