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  5. HORVU2Hr1G068120.2

HORVU2Hr1G068120.2


Description : component *(uL29) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G068120.2
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.04 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.04 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.04 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.03 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.B00059.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C03268.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.E03085.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
GRMZM2G043279 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Glyma.10G291500 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Glyma.20G240700 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
MA_10429159g0020 No alias (at5g02610 : 210.0) Ribosomal L29 family protein ;... 0.05 Orthogroups_2024-Update
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.02 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.04 Orthogroups_2024-Update
PSME_00033304-RA No alias (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.03 Orthogroups_2024-Update
Pp1s133_93V6 No alias 60s ribosomal protein l35 0.04 Orthogroups_2024-Update
Pp1s1_489V6 No alias 60s ribosomal protein l35 0.05 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.03 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.05 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.06 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.03 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.04 Orthogroups_2024-Update
evm.model.tig00000241.79 No alias (at3g55170 : 158.0) Ribosomal L29 family protein ;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 28 84
No external refs found!