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  5. HORVU2Hr1G068960.4

HORVU2Hr1G068960.4


Description : transcriptional regulator *(FIT) of iron homeostasis & bHLH-type transcription factor


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G068960.4
Cluster HCAA Clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Bradi5g01900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
MA_28638g0010 No alias (at4g29930 : 87.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00047880-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s72_3V6 No alias dna binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 104 148
No external refs found!