1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU2Hr1G072600.11

HORVU2Hr1G072600.11


Description : histone deacetylase *(HDA8)


Gene families : OG_42_0000706 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G072600.11
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi5g09190 No alias histone deacetylase 9 0.02 Orthogroups_2024-Update
Cre09.g387393 No alias histone deacetylase 1 0.02 Orthogroups_2024-Update
Glyma.17G085700 No alias histone deacetylase 6 0.02 Orthogroups_2024-Update
Sobic.004G091200.1 No alias deacetylase component *(HDA19) of SNL-HDA19 histone... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 1 108
No external refs found!