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  5. HORVU2Hr1G077630.1

HORVU2Hr1G077630.1


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G077630.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08860 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g23230 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G086610.4 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
LOC_Os09g39730 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
MA_38565g0010 No alias (at3g45980 : 175.0) Encodes a histone 2B (H2B) protein.... 0.02 Orthogroups_2024-Update
Pp1s98_232V6 No alias histone h2b 0.02 Orthogroups_2024-Update
evm.model.contig_498.4 No alias (p16868|h2b4_volca : 127.0) Histone H2B.4 (H2B-IV) -... 0.02 Orthogroups_2024-Update
evm.model.tig00000093.85 No alias (p16868|h2b4_volca : 140.0) Histone H2B.4 (H2B-IV) -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 36 157
No external refs found!