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  5. HORVU2Hr1G078910.2

HORVU2Hr1G078910.2


Description : regulatory factor *(RBP45/47) of mRNA stress granule formation


Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G078910.2
Cluster HCAA Clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26210 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Bradi1g59700 No alias RNA-binding protein 45A 0.04 Orthogroups_2024-Update
MA_108444g0010 No alias (at5g54900 : 167.0) RNA-binding protein 45A (RBP45A);... 0.03 Orthogroups_2024-Update
Mp8g07840.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Orthogroups_2024-Update
PSME_00014443-RA No alias (at5g19350 : 396.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00049035-RA No alias (at5g54900 : 346.0) RNA-binding protein 45A (RBP45A);... 0.03 Orthogroups_2024-Update
Seita.1G203200.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.04 Orthogroups_2024-Update
Sopen04g032920 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update
Sopen10g001250 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 30 100
No external refs found!