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  5. HORVU2Hr1G079550.1

HORVU2Hr1G079550.1


Description : histone *(H3)


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G079550.1
Cluster HCAA Clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Solyc01g095650 No alias Histone H3 like protein (AHRD V3.3 *-* Q7XIZ8_TURGL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 9 131
No external refs found!