1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU2Hr1G080200.1

HORVU2Hr1G080200.1


Description : auxin efflux transporter *(ABCB19) & subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G080200.1
Cluster HCAA Clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
At4g25960 No alias ABC transporter B family member 2... 0.03 Orthogroups_2024-Update
Bradi2g48610 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Bradi3g10680 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
GRMZM5G891159 No alias P-glycoprotein 20 0.03 Orthogroups_2024-Update
Glyma.16G078100 No alias ABC transporter family protein 0.04 Orthogroups_2024-Update
Glyma.17G041200 No alias P-glycoprotein 11 0.04 Orthogroups_2024-Update
HORVU4Hr1G077060.4 No alias ABC-B-type transporter *(AMN3) & subfamily ABCB transporter 0.05 Orthogroups_2024-Update
HORVU6Hr1G035040.3 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
PSME_00005534-RA No alias (at3g62150 : 1137.0) P-glycoprotein 21 (PGP21);... 0.02 Orthogroups_2024-Update
PSME_00016535-RA No alias (at3g28860 : 1775.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
PSME_00023263-RA No alias (q6yuu5|mdr_orysa : 1044.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.03 Orthogroups_2024-Update
Potri.017G081100 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
Pp1s121_11V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.1G191000.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.004G073500.2 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1044 1192
IPR003439 ABC_transporter-like 397 544
IPR011527 ABC1_TM_dom 60 326
IPR011527 ABC1_TM_dom 704 974
No external refs found!