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  5. At3g01270

At3g01270


Description : Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g01270
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
A4A49_40134 No alias putative pectate lyase p59 0.03 Orthogroups_2024-Update
A4A49_40716 No alias putative pectate lyase 16 0.02 Orthogroups_2024-Update
Bradi5g01135 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00588.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Glyma.01G042700 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.02G020600 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.04G173900 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.13G145900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G020200 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
LOC_Os10g31910 No alias pectate lyase precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10394547g0010 No alias (at4g22090 : 188.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00019558-RA No alias (at4g13710 : 625.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020308-RA No alias (at4g13710 : 598.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020782-RA No alias (at5g63180 : 492.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00023843-RA No alias (at4g13710 : 610.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00036578-RA No alias (at5g48900 : 578.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Pp1s355_16V6 No alias pectate lyase 0.02 Orthogroups_2024-Update
Sopen01g006390 No alias Pectate lyase 0.03 Orthogroups_2024-Update
Sopen02g016600 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen09g024960 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030570 pectate lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007524 Pec_lyase_N 26 102
IPR002022 Pec_lyase 209 390
No external refs found!