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  5. HORVU2Hr1G082010.3

HORVU2Hr1G082010.3


Description : Unknown function


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G082010.3
Cluster HCAA Clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G001710.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g086720 No alias C2 domain-containing family protein (AHRD V3.3 *** B9GFS0_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 461 575
IPR000008 C2_dom 295 407
No external refs found!