Description : Paired amphipathic helix protein Sin3-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH9]
Gene families : OG_42_0000363 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000363_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At3g01320 | |
Cluster | HCCA clusters: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
440352 | No alias | SIN3-like 3 | 0.02 | Orthogroups_2024-Update | |
Bradi2g00860 | No alias | SIN3-like 4 | 0.05 | Orthogroups_2024-Update | |
Bradi2g40052 | No alias | SIN3-like 4 | 0.07 | Orthogroups_2024-Update | |
Brara.A03931.1 | No alias | component *(SNL) of histone deacetylase machineries | 0.03 | Orthogroups_2024-Update | |
GRMZM2G334457 | No alias | SIN3-like 4 | 0.03 | Orthogroups_2024-Update | |
Glyma.01G038300 | No alias | SIN3-like 4 | 0.03 | Orthogroups_2024-Update | |
Glyma.02G026700 | No alias | SIN3-like 4 | 0.08 | Orthogroups_2024-Update | |
Glyma.08G292900 | No alias | SIN3-like 3 | 0.09 | Orthogroups_2024-Update | |
Glyma.13G067800 | No alias | SIN3-like 2 | 0.04 | Orthogroups_2024-Update | |
Glyma.18G130400 | No alias | SIN3-like 4 | 0.06 | Orthogroups_2024-Update | |
Glyma.19G016300 | No alias | SIN3-like 2 | 0.06 | Orthogroups_2024-Update | |
MA_18241g0010 | No alias | (at1g70060 : 799.0) Encodes a homolog of the... | 0.06 | Orthogroups_2024-Update | |
PSME_00032314-RA | No alias | (at1g70060 : 409.0) Encodes a homolog of the... | 0.02 | Orthogroups_2024-Update | |
Pp1s178_148V6 | No alias | sin3 histone deacetylase complex | 0.02 | Orthogroups_2024-Update | |
Seita.5G073400.1 | No alias | component *(SNL) of histone deacetylase machineries | 0.05 | Orthogroups_2024-Update | |
Solyc02g067570 | No alias | Paired amphipathic helix SIN3-like protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00001155.28 | No alias | (at3g01320 : 124.0) Encodes SIN3-like 1, a homolog of... | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00021234.23 | No alias | (at1g24190 : 93.2) Enhances AtERF7-mediated ... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005801 | cis-Golgi network | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0030677 | ribonuclease P complex | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
No external refs found! |