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  5. HORVU2Hr1G082870.2

HORVU2Hr1G082870.2


Description : SMARCC component *(SWI3) of chromatin remodeling complex


Gene families : OG_42_0003817 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G082870.2
Cluster HCAA Clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G064328 No alias switch subunit 3 0.03 Orthogroups_2024-Update
PSME_00016381-RA No alias (at2g47620 : 260.0) Homologous to yeast SWI3 and a... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007526 SWIRM 27 118
No external refs found!