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  5. HORVU2Hr1G083090.1

HORVU2Hr1G083090.1


Description : Unknown function


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G083090.1
Cluster HCAA Clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G123000 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
MA_10429180g0010 No alias (at1g24130 : 233.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Potri.015G070900 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s39_313V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G007200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G123000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g005020 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen12g022590 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 204 233
IPR001680 WD40_repeat 346 377
IPR001680 WD40_repeat 298 332
IPR001680 WD40_repeat 239 274
IPR001680 WD40_repeat 388 442
No external refs found!