HORVU2Hr1G084980.5

Description : Unknown function

Gene families : OG_42_0001255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU2Hr1G084980.5
Cluster	HCAA Clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g42940	No alias	RNA-binding CRS1 / YhbY (CRM) domain protein	0.02	Orthogroups_2024-Update
Glyma.05G002800	No alias	RNA-binding CRS1 / YhbY (CRM) domain protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G019580.2	No alias	splicing factor *(CFM9)	0.03	Orthogroups_2024-Update
Potri.002G239200	No alias	RNA-binding CRS1 / YhbY (CRM) domain protein	0.03	Orthogroups_2024-Update
Pp1s55_63V6	No alias	unknow protein	0.04	Orthogroups_2024-Update
Seita.4G132500.1	No alias	splicing factor *(CFM6/7)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009606	tropism	IEP	Predicted GO
BP	GO:0010274	hydrotropism	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	263	347

External Links

No external refs found!