1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g01370

At3g01370


Description : CRM-domain containing factor CFM2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C2]


Gene families : OG_42_0000921 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g01370
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi4g14900 No alias CRM family member 3A 0.02 Orthogroups_2024-Update
Brara.A02949.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G078412 No alias ortholog of maize chloroplast splicing factor CRS1 0.03 Orthogroups_2024-Update
HORVU2Hr1G081140.18 No alias plastidial RNA splicing factor *(CFM2) 0.04 Orthogroups_2024-Update
Sobic.002G181000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G110200.2 No alias plastidial RNA splicing factor *(CFM2) 0.02 Orthogroups_2024-Update
Sobic.009G223200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 378 462
IPR001890 RNA-binding_CRM 875 961
IPR001890 RNA-binding_CRM 166 249
IPR001890 RNA-binding_CRM 580 666
No external refs found!