Description : Unknown function
Gene families : OG_42_0001552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU2Hr1G086360.3 | |
Cluster | HCAA Clusters: Cluster_168 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
271663 | No alias | ribosomal protein L23AB | 0.04 | Orthogroups_2024-Update | |
A4A49_21337 | No alias | 60s ribosomal protein l23a | 0.05 | Orthogroups_2024-Update | |
A4A49_58225 | No alias | 60s ribosomal protein l23a | 0.05 | Orthogroups_2024-Update | |
A4A49_63547 | No alias | 60s ribosomal protein l23a | 0.05 | Orthogroups_2024-Update | |
A4A49_64626 | No alias | 60s ribosomal protein l23a | 0.05 | Orthogroups_2024-Update | |
At2g39460 | No alias | 60S ribosomal protein L23a-1... | 0.04 | Orthogroups_2024-Update | |
At3g55280 | No alias | 60S ribosomal protein L23a-2... | 0.04 | Orthogroups_2024-Update | |
Bradi1g06220 | No alias | ribosomal protein L23AB | 0.05 | Orthogroups_2024-Update | |
Bradi5g14750 | No alias | ribosomal protein L23AB | 0.05 | Orthogroups_2024-Update | |
Brara.C02018.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.E00623.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Cre06.g282500 | No alias | ribosomal protein L23AA | 0.09 | Orthogroups_2024-Update | |
GRMZM2G083253 | No alias | ribosomal protein L23AB | 0.07 | Orthogroups_2024-Update | |
Glyma.11G143400 | No alias | ribosomal protein L23AB | 0.03 | Orthogroups_2024-Update | |
Glyma.12G066700 | No alias | ribosomal protein L23AB | 0.05 | Orthogroups_2024-Update | |
Glyma.13G332700 | No alias | ribosomal protein L23AB | 0.03 | Orthogroups_2024-Update | |
Glyma.15G041500 | No alias | ribosomal protein L23AB | 0.06 | Orthogroups_2024-Update | |
Glyma.18G286400 | No alias | ribosomal protein L23AB | 0.04 | Orthogroups_2024-Update | |
MA_10430928g0010 | No alias | (q9at35|rl23a_dauca : 175.0) 60S ribosomal protein L23a... | 0.05 | Orthogroups_2024-Update | |
Mp2g00570.1 | No alias | component RPL23a of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
PSME_00022599-RA | No alias | (q9at35|rl23a_dauca : 186.0) 60S ribosomal protein L23a... | 0.03 | Orthogroups_2024-Update | |
Potri.008G050200 | No alias | ribosomal protein L23AB | 0.05 | Orthogroups_2024-Update | |
Potri.009G027000 | No alias | ribosomal protein L23AB | 0.02 | Orthogroups_2024-Update | |
Pp1s146_96V6 | No alias | 60S ribosomal protein L23A [Fritillaria agrestis] | 0.04 | Orthogroups_2024-Update | |
Pp1s46_72V6 | No alias | 60S ribosomal protein L23A [Fritillaria agrestis] | 0.12 | Orthogroups_2024-Update | |
Pp1s47_274V6 | No alias | 60S ribosomal protein L23A [Fritillaria agrestis] | 0.09 | Orthogroups_2024-Update | |
Seita.1G230300.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Seita.7G156000.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.006G137100.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Sobic.010G060500.1 | No alias | component *(uL23) of large ribosomal-subunit (LSU) proteome | 0.15 | Orthogroups_2024-Update | |
Solyc02g092080 | No alias | 60S ribosomal protein L23a (AHRD V3.3 *** RL23A_DAUCA) | 0.02 | Orthogroups_2024-Update | |
Solyc09g005720 | No alias | 60S ribosomal protein L23A (AHRD V3.3 *** A0A0B2RCV3_GLYSO) | 0.04 | Orthogroups_2024-Update | |
Solyc10g084610 | No alias | 60S ribosomal protein L23a (AHRD V3.3 *** RL23A_DAUCA) | 0.11 | Orthogroups_2024-Update | |
Solyc10g086330 | No alias | 60S ribosomal protein L23a (AHRD V3.3 *** RL23A_DAUCA) | 0.06 | Orthogroups_2024-Update | |
Sopen09g001610 | No alias | Ribosomal protein L23, N-terminal domain | 0.09 | Orthogroups_2024-Update | |
Sopen10g035710 | No alias | Ribosomal protein L23, N-terminal domain | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3754.2 | No alias | (q07761|rl23a_tobac : 174.0) 60S ribosomal protein L23a... | 0.12 | Orthogroups_2024-Update | |
evm.model.tig00000037.39 | No alias | (q07761|rl23a_tobac : 188.0) 60S ribosomal protein L23a... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
BP | GO:0030488 | tRNA methylation | IEP | Predicted GO |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
CC | GO:0034708 | methyltransferase complex | IEP | Predicted GO |
BP | GO:0042255 | ribosome assembly | IEP | Predicted GO |
BP | GO:0042256 | mature ribosome assembly | IEP | Predicted GO |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
BP | GO:0045048 | protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013025 | Ribosomal_L25/23 | 86 | 131 |
No external refs found! |