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  5. HORVU2Hr1G086980.7

HORVU2Hr1G086980.7


Description : Unknown function


Gene families : OG_42_0003322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G086980.7
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Pp1s287_25V6 No alias f-box-containing protein 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 258 317
IPR001611 Leu-rich_rpt 330 344
IPR001611 Leu-rich_rpt 354 373
IPR001611 Leu-rich_rpt 183 205
IPR001611 Leu-rich_rpt 451 466
IPR001611 Leu-rich_rpt 401 422
IPR001611 Leu-rich_rpt 232 254
No external refs found!