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  5. Solyc03g078400

Solyc03g078400


Description : actin


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g078400
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
178381 No alias actin 7 0.03 Orthogroups_2024-Update
At1g49240 No alias Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293] 0.03 Orthogroups_2024-Update
At3g12110 No alias Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496] 0.03 Orthogroups_2024-Update
Brara.C03705.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Glyma.12G063400 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.03 Orthogroups_2024-Update
LOC_Os03g61970 No alias actin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005334-RA No alias (at5g09810 : 729.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
PSME_00011258-RA No alias (o81221|act_goshi : 662.0) Actin - Gossypium hirsutum... 0.03 Orthogroups_2024-Update
Seita.5G464000.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Sopen04g005680 No alias Actin 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!