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  5. HORVU2Hr1G088350.1

HORVU2Hr1G088350.1


Description : Unknown function


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G088350.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Bradi1g16044 No alias Ribonuclease H-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g11433 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi4g27711 No alias Ribonuclease H-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G016060.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G036590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G043670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G057810.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G088130.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G041190.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G001830.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G106390.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G047590.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G012080.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G062780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G077730.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G101000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!