- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase
Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G089540.1 | |
| Cluster | HCAA Clusters: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_16794 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| A4A49_26864 | No alias | phenylalanine ammonia-lyase | 0.03 | Orthogroups_2024-Update | |
| A4A49_27559 | No alias | phenylalanine ammonia-lyase | 0.04 | Orthogroups_2024-Update | |
| At2g37040 | No alias | Phenylalanine ammonia-lyase 1... | 0.04 | Orthogroups_2024-Update | |
| At3g53260 | No alias | Phenylalanine ammonia-lyase 2... | 0.04 | Orthogroups_2024-Update | |
| Bradi3g49260 | No alias | PHE ammonia lyase 1 | 0.07 | Orthogroups_2024-Update | |
| Bradi3g49280 | No alias | PHE ammonia lyase 1 | 0.03 | Orthogroups_2024-Update | |
| Bradi5g15830 | No alias | PHE ammonia lyase 1 | 0.11 | Orthogroups_2024-Update | |
| Brara.B00136.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.D02252.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G029048 | No alias | PHE ammonia lyase 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.10G058200 | No alias | PHE ammonia lyase 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G145000 | No alias | PHE ammonia lyase 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G182300 | No alias | PHE ammonia lyase 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G180800 | No alias | phenylalanine ammonia-lyase 2 | 0.03 | Orthogroups_2024-Update | |
| MA_123220g0010 | No alias | (p24481|pal1_petcr : 912.0) Phenylalanine ammonia-lyase... | 0.04 | Orthogroups_2024-Update | |
| MA_44561g0010 | No alias | (p45729|pal3_petcr : 870.0) Phenylalanine ammonia-lyase... | 0.03 | Orthogroups_2024-Update | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Orthogroups_2024-Update | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Orthogroups_2024-Update | |
| Potri.016G091100 | No alias | PHE ammonia lyase 1 | 0.03 | Orthogroups_2024-Update | |
| Pp1s500_4V6 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| Pp1s52_44V6 | No alias | phenylalanine ammonia-lyase | 0.02 | Orthogroups_2024-Update | |
| Seita.1G240300.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.04 | Orthogroups_2024-Update | |
| Seita.1G240600.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.03 | Orthogroups_2024-Update | |
| Seita.7G168800.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.06 | Orthogroups_2024-Update | |
| Sobic.001G160500.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G220600.2 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G220700.1 | No alias | phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase | 0.06 | Orthogroups_2024-Update | |
| Solyc05g056170 | No alias | phenylalanine ammonia-lyase 2 | 0.03 | Orthogroups_2024-Update | |
| Solyc09g007910 | No alias | Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL5_SOLLC) | 0.06 | Orthogroups_2024-Update | |
| Solyc10g086180 | No alias | Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL2_TOBAC) | 0.05 | Orthogroups_2024-Update | |
| Sopen05g034580 | No alias | Aromatic amino acid lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen10g035560 | No alias | Aromatic amino acid lyase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| CC | GO:0005811 | lipid droplet | IEP | Predicted GO |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
| BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Predicted GO |
| BP | GO:0009415 | response to water | IEP | Predicted GO |
| CC | GO:0009507 | chloroplast | IEP | Predicted GO |
| CC | GO:0009536 | plastid | IEP | Predicted GO |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Predicted GO |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
| MF | GO:0016229 | steroid dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Predicted GO |
| MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 62 | 460 |
| No external refs found! |