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Description : Putative pentatricopeptide repeat-containing protein At3g01580 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS97]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At3g01580 | |
| Cluster | HCCA clusters: Cluster_188 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 102435 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 71953 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 76175 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 85926 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 96927 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| At2g33760 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | Orthogroups_2024-Update | |
| At2g39620 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.05 | Orthogroups_2024-Update | |
| Bradi4g22520 | No alias | mitochondrial editing factor 22 | 0.03 | Orthogroups_2024-Update | |
| Brara.H01750.1 | No alias | RNA editing factor *(SLO4) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G161368 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G078800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G173900 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G172502 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| MA_10157572g0010 | No alias | (at4g18750 : 548.0) Encodes a pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| MA_140591g0010 | No alias | (at1g11290 : 675.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00011140-RA | No alias | (at1g11290 : 575.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00011207-RA | No alias | (at3g63370 : 641.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
| PSME_00011574-RA | No alias | (at1g16480 : 646.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00024580-RA | No alias | (at4g02750 : 440.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| PSME_00032959-RA | No alias | (at3g46790 : 529.0) Encodes a member of a PCMP (plant... | 0.04 | Orthogroups_2024-Update | |
| PSME_00036639-RA | No alias | (at1g11290 : 691.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056594-RA | No alias | (at3g53360 : 383.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.002G245200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Solyc01g007850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g002910 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen02g025050 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen02g033370 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
| Sopen03g002990 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen03g034990 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen04g022860 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
| Sopen07g001950 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
| Sopen09g031050 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| CC | GO:0005618 | cell wall | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0048046 | apoplast | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| No external refs found! |