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  5. HORVU2Hr1G094400.5

HORVU2Hr1G094400.5


Description : linker histone *(H1)


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G094400.5
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_19166 No alias histone h1 0.02 Orthogroups_2024-Update
Bradi1g55260 No alias winged-helix DNA-binding transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi5g19000 No alias histone H1-3 0.04 Orthogroups_2024-Update
GRMZM2G080274 No alias histone H1-3 0.06 Orthogroups_2024-Update
GRMZM2G121221 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
GRMZM2G401308 No alias winged-helix DNA-binding transcription factor family protein 0.06 Orthogroups_2024-Update
Glyma.10G163300 No alias winged-helix DNA-binding transcription factor family protein 0.02 Orthogroups_2024-Update
MA_500183g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.06 Orthogroups_2024-Update
MA_6409g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00053828-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.002G043100 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.005G219800 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Solyc06g084020 No alias histone H1 0.04 Orthogroups_2024-Update
Solyc09g083380 No alias Histone H1 (AHRD V3.3 *-* H1_MAIZE) 0.03 Orthogroups_2024-Update
Sopen06g035400 No alias linker histone H1 and H5 family 0.02 Orthogroups_2024-Update
Sopen09g032300 No alias linker histone H1 and H5 family 0.03 Orthogroups_2024-Update
evm.model.contig_2062.24 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA 16Dec
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006334 nucleosome assembly IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 37 103
No external refs found!