Description : component *(uS17) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0002289 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002289_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU2Hr1G099230.8 | |
Cluster | HCAA Clusters: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
268639 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.03 | Orthogroups_2024-Update | |
A4A49_60485 | No alias | 40s ribosomal protein s11 | 0.1 | Orthogroups_2024-Update | |
At4g30800 | No alias | 40S ribosomal protein S11-2... | 0.03 | Orthogroups_2024-Update | |
At5g23740 | No alias | RPS11-BETA [Source:UniProtKB/TrEMBL;Acc:A0A178UPD3] | 0.03 | Orthogroups_2024-Update | |
Bradi3g48600 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g21630 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.13 | Orthogroups_2024-Update | |
Brara.A02200.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
Brara.B03705.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Brara.F01642.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
Brara.F02607.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.I00599.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Cre12.g514500 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.11 | Orthogroups_2024-Update | |
GRMZM2G019325 | No alias | ribosomal protein S11-beta | 0.15 | Orthogroups_2024-Update | |
GRMZM2G044800 | No alias | ribosomal protein S11-beta | 0.1 | Orthogroups_2024-Update | |
Glyma.09G094200 | No alias | ribosomal protein S11-beta | 0.06 | Orthogroups_2024-Update | |
Glyma.13G165200 | No alias | ribosomal protein S11-beta | 0.09 | Orthogroups_2024-Update | |
HORVU6Hr1G056610.7 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Kfl00435_0080 | kfl00435_0080_v1.1 | (p17093|rs11_soybn : 243.0) 40S ribosomal protein S11 -... | 0.08 | Orthogroups_2024-Update | |
LOC_Os04g52361 | No alias | ribosomal protein S17, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_19350g0010 | No alias | (at3g48930 : 247.0) embryo defective 1080 (EMB1080);... | 0.04 | Orthogroups_2024-Update | |
Mp4g23360.1 | No alias | component RPS11 of SSU proteome | 0.02 | Orthogroups_2024-Update | |
Mp6g10500.1 | No alias | component RPS11 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
Potri.002G140400 | No alias | ribosomal protein S11-beta | 0.09 | Orthogroups_2024-Update | |
Potri.014G053300 | No alias | ribosomal protein S11-beta | 0.11 | Orthogroups_2024-Update | |
Potri.018G115400 | No alias | ribosomal protein S11-beta | 0.07 | Orthogroups_2024-Update | |
Pp1s21_269V6 | No alias | 40s ribosomal protein s11 | 0.19 | Orthogroups_2024-Update | |
Pp1s30_89V6 | No alias | 40s ribosomal protein s11 | 0.11 | Orthogroups_2024-Update | |
Pp1s51_307V6 | No alias | 40s ribosomal protein s11 | 0.08 | Orthogroups_2024-Update | |
Pp1s79_58V6 | No alias | 40s ribosomal protein s11 | 0.12 | Orthogroups_2024-Update | |
Seita.1G231100.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
Seita.7G157100.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Seita.7G234800.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.004G213200.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.006G138100.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
Sobic.006G213000.1 | No alias | component *(uS17) of small ribosomal-subunit (SSU) proteome | 0.2 | Orthogroups_2024-Update | |
Solyc06g073790 | No alias | 40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU) | 0.12 | Orthogroups_2024-Update | |
Solyc06g073800 | No alias | 40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU) | 0.12 | Orthogroups_2024-Update | |
Solyc12g042080 | No alias | 40s ribosomal protein S11 (AHRD V3.3 *** K7XKQ3_SOLTU) | 0.09 | Orthogroups_2024-Update | |
Sopen06g030190 | No alias | Ribosomal protein S17 | 0.16 | Orthogroups_2024-Update | |
Sopen12g021180 | No alias | Ribosomal protein S17 | 0.14 | Orthogroups_2024-Update | |
evm.model.contig_3727.5 | No alias | (at4g30800 : 197.0) Nucleic acid-binding, OB-fold-like... | 0.22 | Orthogroups_2024-Update | |
evm.model.tig00000551.22 | No alias | (p17093|rs11_soybn : 211.0) 40S ribosomal protein S11 -... | 0.16 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
No external refs found! |