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  5. HORVU2Hr1G104920.12

HORVU2Hr1G104920.12


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G104920.12
Cluster HCAA Clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G057459 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
HORVU5Hr1G063480.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
PSME_00001292-RA No alias (at4g35290 : 567.0) Encodes a putative glutamate... 0.03 Orthogroups_2024-Update
Potri.002G230000 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
Potri.004G052500 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Solyc06g063190 No alias glutamate receptor-like 2.3 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 808 842
IPR001828 ANF_lig-bd_rcpt 46 405
IPR001638 Solute-binding_3/MltF_N 475 807
No external refs found!