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  5. HORVU2Hr1G106410.9

HORVU2Hr1G106410.9


Description : starch synthase *(SS3)


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G106410.9
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre16.g665800 No alias starch synthase 4 0.02 Orthogroups_2024-Update
GRMZM2G121612 No alias starch synthase 3 0.05 Orthogroups_2024-Update
Glyma.08G082600 No alias starch synthase 4 0.03 Orthogroups_2024-Update
Glyma.13G204700 No alias starch synthase 3 0.04 Orthogroups_2024-Update
Glyma.15G108000 No alias starch synthase 3 0.05 Orthogroups_2024-Update
LOC_Os04g53310 No alias soluble starch synthase 3, chloroplast precursor,... 0.05 Orthogroups_2024-Update
Mp1g14910.1 No alias starch synthase (SSIV) 0.03 Orthogroups_2024-Update
Mp1g23570.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 Orthogroups_2024-Update
Mp2g20000.1 No alias starch synthase (SSIII) 0.03 Orthogroups_2024-Update
Potri.004G014100 No alias starch synthase 3 0.03 Orthogroups_2024-Update
Seita.7G243900.1 No alias starch synthase *(SS3) 0.06 Orthogroups_2024-Update
Sobic.006G221000.1 No alias starch synthase *(SS3) 0.07 Orthogroups_2024-Update
evm.model.tig00020746.8 No alias (at4g18240 : 154.0) starch synthase 4 (SS4); FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
MF GO:2001070 starch binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 882 1069
IPR001296 Glyco_trans_1 1128 1250
IPR005085 CBM25 624 711
IPR005085 CBM25 786 871
IPR005085 CBM25 450 529
No external refs found!