HORVU2Hr1G107120.2

Description : organelle RNA splicing factor *(APO)

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU2Hr1G107120.2
Cluster	HCAA Clusters: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.12G195300	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.03	Orthogroups_2024-Update
PSME_00004749-RA	No alias	(at5g61930 : 364.0) ACCUMULATION OF PHOTOSYSTEM ONE 3;...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	213	322
IPR023342	APO_dom	42	190

External Links

No external refs found!