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  5. HORVU2Hr1G113180.3

HORVU2Hr1G113180.3


Description : phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG_42_0001120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001120_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G113180.3
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
149626 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
Brara.H01217.1 No alias phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Cre07.g344400 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
Cre07.g344550 No alias D-3-phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
LOC_Os08g34720 No alias D-3-phosphoglycerate dehydrogenase, chloroplast... 0.03 Orthogroups_2024-Update
MA_53302g0010 No alias (at4g34200 : 758.0) embryo sac development arrest 9... 0.02 Orthogroups_2024-Update
Pp1s87_117V6 No alias phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
Seita.7G265100.1 No alias phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Sobic.006G243400.1 No alias phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase... 0.04 Orthogroups_2024-Update
Sobic.007G145000.1 No alias phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase... 0.04 Orthogroups_2024-Update
Sopen03g031170 No alias D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 0.04 Orthogroups_2024-Update
evm.model.contig_509.4 No alias (at4g34200 : 359.0) embryo sac development arrest 9... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA 16Dec
MF GO:0051287 NAD binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006140 D-isomer_DH_NAD-bd 16 191
IPR002912 ACT_dom 382 442
IPR006139 D-isomer_2_OHA_DH_cat_dom 1 223
No external refs found!