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At3g03220


Description : Expansin-A13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P0]


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g03220
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
MA_134592g0010 No alias (q40636|expa2_orysa : 350.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00009799-RA No alias (at1g26770 : 387.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Potri.004G080200 No alias expansin A13 0.02 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.02 Orthogroups_2024-Update
Potri.008G057100 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.019G057500 No alias expansin A8 0.03 Orthogroups_2024-Update
Pp1s33_259V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s363_2V6 No alias expansin 2 0.03 Orthogroups_2024-Update
Sopen03g034350 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 76 161
IPR007117 Expansin_CBD 172 249
No external refs found!