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  5. HORVU2Hr1G121580.1

HORVU2Hr1G121580.1


Description : Unknown function


Gene families : OG_42_0003102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G121580.1
Cluster HCAA Clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
137879 No alias photosystem II reaction center protein D 0.04 Orthogroups_2024-Update
Bradi1g78076 No alias photosystem II reaction center protein D 0.04 Orthogroups_2024-Update
LOC_Os04g16872 No alias photosystem II D2 protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00000502-RA No alias (q36814|psbd_wheat : 260.0) Photosystem II D2 protein... 0.04 Orthogroups_2024-Update
PSME_00012989-RA No alias (p06007|psbd_chlre : 161.0) Photosystem II D2 protein... 0.04 Orthogroups_2024-Update
PSME_00012991-RA No alias (p06404|psbd_marpo : 116.0) Photosystem II D2 protein... 0.04 Orthogroups_2024-Update
PSME_00053850-RA No alias (p10803|psbd_secce : 587.0) Photosystem II D2 protein... 0.04 Orthogroups_2024-Update
Potri.001G331000 No alias photosystem II reaction center protein D 0.03 Orthogroups_2024-Update
Solyc09g055950 No alias Photosystem II D2 protein (AHRD V3.3 *-* PSBD_MANES) 0.04 Orthogroups_2024-Update
Sopen07g004960 No alias Photosynthetic reaction centre protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA 16Dec
BP GO:0019684 photosynthesis, light reaction IEA 16Dec
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 1 101
No external refs found!