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  5. HORVU2Hr1G121590.1

HORVU2Hr1G121590.1


Description : Unknown function


Gene families : OG_42_0002207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G121590.1
Cluster HCAA Clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
137689 No alias photosystem II reaction center protein C 0.03 Orthogroups_2024-Update
Bradi1g70724 No alias photosystem II reaction center protein C 0.04 Orthogroups_2024-Update
Bradi1g78082 No alias photosystem II reaction center protein C 0.04 Orthogroups_2024-Update
LOC_Os02g24632 No alias photosystem II 44 kDa reaction center protein, putative,... 0.04 Orthogroups_2024-Update
PSME_00001174-RA No alias (p41643|psbc_pinth : 422.0) Photosystem II 44 kDa... 0.07 Orthogroups_2024-Update
PSME_00003195-RA No alias (p41643|psbc_pinth : 452.0) Photosystem II 44 kDa... 0.06 Orthogroups_2024-Update
PSME_00003196-RA No alias (p41643|psbc_pinth : 96.7) Photosystem II 44 kDa... 0.04 Orthogroups_2024-Update
PSME_00038449-RA No alias (p41643|psbc_pinth : 132.0) Photosystem II 44 kDa... 0.06 Orthogroups_2024-Update
Seita.4G174200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.J018300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G276500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G299900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc10g017940 No alias Photosystem II CP43 reaction center protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc10g047410 No alias Photosystem II CP43 reaction center protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen01g011530 No alias Photosystem II protein 0.07 Orthogroups_2024-Update
Sopen07g019860 No alias Photosystem II protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA 16Dec
BP GO:0009767 photosynthetic electron transport chain IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016168 chlorophyll binding IEA 16Dec
BP GO:0019684 photosynthesis, light reaction IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 1 126
No external refs found!