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  5. HORVU2Hr1G121820.5

HORVU2Hr1G121820.5


Description : component *(PsbA/D1) of PS-II reaction center complex


Gene families : OG_42_0001749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001749_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G121820.5
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Brara.B03183.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G121700.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc02g011990 No alias Photosystem II protein D1 (AHRD V3.3 *** F1KC16_9ASTE) 0.04 Orthogroups_2024-Update
Solyc05g016120 No alias Photosystem II protein D1 (AHRD V3.3 *-* PSBA_BARVE) 0.04 Orthogroups_2024-Update
Solyc11g056340 No alias LOW QUALITY:Photosystem II protein D1 (AHRD V3.3 *-* PSBA_SOLNI) 0.04 Orthogroups_2024-Update
Sopen01g008050 No alias Photosynthetic reaction centre protein 0.05 Orthogroups_2024-Update
Sopen02g002740 No alias Photosynthetic reaction centre protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA 16Dec
BP GO:0019684 photosynthesis, light reaction IEA 16Dec
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 28 327
No external refs found!