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  5. HORVU2Hr1G124880.1

HORVU2Hr1G124880.1


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G124880.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
83983 No alias tubby like protein 3 0.04 Orthogroups_2024-Update
At5g18680 No alias Uncharacterized protein At5g18680 (Fragment)... 0.04 Orthogroups_2024-Update
Bradi1g18380 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Bradi5g27110 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
GRMZM2G108228 No alias tubby like protein 10 0.04 Orthogroups_2024-Update
LOC_Os04g59130 No alias OsFBT6 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.5G325200.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G003300.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g067680 No alias Tubby-like F-box protein (AHRD V3.3 *** M1APZ0_SOLTU) 0.03 Orthogroups_2024-Update
Sopen01g029620 No alias Tub family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 203 252
IPR000007 Tubby_C 264 616
No external refs found!