Description : component *(uL6) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0002219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002219_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU3Hr1G001140.5 | |
Cluster | HCAA Clusters: Cluster_246 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
269009 | No alias | Ribosomal protein L6 family | 0.12 | Orthogroups_2024-Update | |
A4A49_13754 | No alias | 60s ribosomal protein l9-1 | 0.02 | Orthogroups_2024-Update | |
At4g10450 | No alias | 60S ribosomal protein L9-2... | 0.08 | Orthogroups_2024-Update | |
Bradi1g21850 | No alias | Ribosomal protein L6 family | 0.07 | Orthogroups_2024-Update | |
Bradi1g52040 | No alias | Ribosomal protein L6 family | 0.03 | Orthogroups_2024-Update | |
Bradi3g00640 | No alias | Ribosomal protein L6 family | 0.05 | Orthogroups_2024-Update | |
Brara.B02434.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.B02733.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.I02353.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.I02694.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Cre12.g494050 | No alias | Ribosomal protein L6 family | 0.11 | Orthogroups_2024-Update | |
Glyma.04G226500 | No alias | Ribosomal protein L6 family | 0.04 | Orthogroups_2024-Update | |
Glyma.04G226900 | No alias | Ribosomal protein L6 family | 0.1 | Orthogroups_2024-Update | |
Glyma.06G138400 | No alias | Ribosomal protein L6 family | 0.05 | Orthogroups_2024-Update | |
Glyma.06G138600 | No alias | Ribosomal protein L6 family | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G002060.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Kfl00025_0220 | kfl00025_0220_v1.1 | (p30707|rl9_pea : 285.0) 60S ribosomal protein L9... | 0.09 | Orthogroups_2024-Update | |
MA_38141g0010 | No alias | (p49210|rl9_orysa : 311.0) 60S ribosomal protein L9 -... | 0.05 | Orthogroups_2024-Update | |
Mp4g24070.1 | No alias | component RPL9 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
Potri.001G454000 | No alias | Ribosomal protein L6 family | 0.07 | Orthogroups_2024-Update | |
Potri.011G148700 | No alias | Ribosomal protein L6 family | 0.06 | Orthogroups_2024-Update | |
Pp1s164_98V6 | No alias | 60s ribosomal protein l9 | 0.05 | Orthogroups_2024-Update | |
Pp1s327_43V6 | No alias | 60s ribosomal protein l9 | 0.09 | Orthogroups_2024-Update | |
Pp1s58_149V6 | No alias | 60s ribosomal protein l9 | 0.08 | Orthogroups_2024-Update | |
Pp1s79_157V6 | No alias | 60s ribosomal protein l9 | 0.09 | Orthogroups_2024-Update | |
Seita.1G003100.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Seita.4G005200.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.010G005300.1 | No alias | component *(uL6) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Solyc08g014550 | No alias | 60S ribosomal L9 (AHRD V3.3 *** A0A0B0N9P7_GOSAR) | 0.1 | Orthogroups_2024-Update | |
Solyc12g096700 | No alias | 60S ribosomal L9 (AHRD V3.3 *** A0A0B0N9P7_GOSAR) | 0.06 | Orthogroups_2024-Update | |
Sopen06g029670 | No alias | Ribosomal protein L6 | 0.17 | Orthogroups_2024-Update | |
Sopen08g005520 | No alias | Ribosomal protein L6 | 0.09 | Orthogroups_2024-Update | |
Sopen12g032530 | No alias | Ribosomal protein L6 | 0.16 | Orthogroups_2024-Update | |
evm.model.contig_564.5 | No alias | (at4g10450 : 215.0) Ribosomal protein L6 family;... | 0.18 | Orthogroups_2024-Update | |
evm.model.tig00001532.12 | No alias | (p49210|rl9_orysa : 196.0) 60S ribosomal protein L9 -... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
MF | GO:0019843 | rRNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Predicted GO |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0010011 | auxin binding | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016603 | glutaminyl-peptide cyclotransferase activity | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
BP | GO:0017186 | peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase | IEP | Predicted GO |
BP | GO:0018199 | peptidyl-glutamine modification | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0042562 | hormone binding | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Predicted GO |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
No external refs found! |