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  5. HORVU3Hr1G003060.16

HORVU3Hr1G003060.16


Description : methylcytosine-specific DNA glycosylase *(ROS1)


Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G003060.16
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Bradi2g23797 No alias demeter-like 1 0.03 Orthogroups_2024-Update
Brara.A00413.1 No alias methylcytosine-specific DNA glycosylase *(ROS1) 0.02 Orthogroups_2024-Update
PSME_00007980-RA No alias (at2g36490 : 147.0) A repressor of transcriptional gene... 0.02 Orthogroups_2024-Update
Sopen03g041220 No alias RRM in Demeter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!