HORVU3Hr1G005810.1

Description : EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase

Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU3Hr1G005810.1
Cluster	HCAA Clusters: Cluster_331

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g14740	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
HORVU1Hr1G003330.2	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
LOC_Os10g26110	No alias	decarboxylase, putative, expressed	0.02	Orthogroups_2024-Update
Potri.013G052800	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Sobic.001G255300.1	No alias	aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase	0.02	Orthogroups_2024-Update
Solyc03g045020	No alias	Tyrosine decarboxylase (AHRD V3.3 *** W5XTE8_SOLTU)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	16Dec
BP	GO:0019752	carboxylic acid metabolic process	IEA	16Dec
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	16Dec
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006788	heme oxidation	IEP	Predicted GO
CC	GO:0009539	photosystem II reaction center	IEP	Predicted GO
CC	GO:0031262	Ndc80 complex	IEP	Predicted GO
BP	GO:0042168	heme metabolic process	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	21	156

External Links

No external refs found!