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  5. HORVU3Hr1G010200.1

HORVU3Hr1G010200.1


Description : RAV/NGATHA-type transcription factor


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G010200.1
Cluster HCAA Clusters: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
Bradi3g32140 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Brara.C03374.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G082227 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Glyma.01G087500 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.02G099500 No alias AP2/B3 transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.07G048200 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
Glyma.10G204400 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G010140.3 No alias RAV/NGATHA-type transcription factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G010190.5 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.03 Orthogroups_2024-Update
HORVU3Hr1G010240.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.04 Orthogroups_2024-Update
LOC_Os01g04800 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00035556-RA No alias (at3g25730 : 293.0) ethylene response DNA binding factor... 0.03 Orthogroups_2024-Update
Potri.010G129200 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.011G149700 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 37 138
No external refs found!