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  5. HORVU3Hr1G011190.1

HORVU3Hr1G011190.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G011190.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_15907 No alias protein far1-related sequence 2 0.03 Orthogroups_2024-Update
Glyma.08G172600 No alias FAR1-related sequence 6 0.04 Orthogroups_2024-Update
LOC_Os09g14040 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Solyc07g008700 No alias Far1-related sequence 9 (AHRD V3.3 *** A0A061E1V5_THECC) 0.03 Orthogroups_2024-Update
Sopen03g040440 No alias FAR1 DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 1 58
No external refs found!