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  5. HORVU3Hr1G014180.3

HORVU3Hr1G014180.3


Description : RUB ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G014180.3
Cluster HCAA Clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Bradi3g04730 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Cre12.g491400 No alias related to ubiquitin 1 0.01 Orthogroups_2024-Update
Glyma.19G195500 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.03 Orthogroups_2024-Update
HORVU3Hr1G110970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G065170.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G029070.1 No alias RUB ubiquitin-fold protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G029100.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
LOC_Os09g27930 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_100402g0010 No alias (at4g02890 : 582.0) Polyubiquitin gene containing 4... 0.03 Orthogroups_2024-Update
Potri.005G198700 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.02 Orthogroups_2024-Update
Seita.2G321300.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.6G079400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G308900.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 128 199
IPR000626 Ubiquitin_dom 52 123
No external refs found!