Description : RNA editing factor *(MEF12)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU3Hr1G015010.23 | |
Cluster | HCAA Clusters: Cluster_261 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
82024 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
At1g08070 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | Orthogroups_2024-Update | |
At3g03580 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.02 | Orthogroups_2024-Update | |
At3g15930 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
Glyma.18G085900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.20G163300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
LOC_Os01g59890 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g68490 | No alias | tetratricopeptide-like helical, putative, expressed | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Predicted GO |
MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006308 | DNA catabolic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006658 | phosphatidylserine metabolic process | IEP | Predicted GO |
BP | GO:0006659 | phosphatidylserine biosynthetic process | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 712 | 736 |
IPR002885 | Pentatricopeptide_repeat | 306 | 327 |
IPR002885 | Pentatricopeptide_repeat | 508 | 527 |
IPR002885 | Pentatricopeptide_repeat | 641 | 667 |
IPR002885 | Pentatricopeptide_repeat | 611 | 634 |
IPR002885 | Pentatricopeptide_repeat | 741 | 785 |
IPR002885 | Pentatricopeptide_repeat | 331 | 378 |
IPR002885 | Pentatricopeptide_repeat | 536 | 580 |
IPR002885 | Pentatricopeptide_repeat | 163 | 211 |
IPR002885 | Pentatricopeptide_repeat | 432 | 480 |
No external refs found! |