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  5. HORVU3Hr1G018550.1

HORVU3Hr1G018550.1


Description : pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G018550.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G153100 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.03 Orthogroups_2024-Update
MA_127819g0010 No alias (p51848|pdc2_orysa : 706.0) Pyruvate decarboxylase... 0.04 Orthogroups_2024-Update
Solyc02g077240 No alias Pyruvate decarboxylase (AHRD V3.3 *** Q1I1D9_CITSI) 0.02 Orthogroups_2024-Update
Sopen06g033520 No alias Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
MF GO:0003824 catalytic activity IEA 16Dec
MF GO:0030976 thiamine pyrophosphate binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 1 94
IPR012000 Thiamin_PyroP_enz_cen_dom 122 239
IPR011766 TPP_enzyme-bd_C 334 457
No external refs found!