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  5. HORVU3Hr1G018810.2

HORVU3Hr1G018810.2


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G018810.2
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_07465 No alias fasciclin-like arabinogalactan protein 11 0.1 Orthogroups_2024-Update
A4A49_28632 No alias fasciclin-like arabinogalactan protein 12 0.07 Orthogroups_2024-Update
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.06 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.11 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Bradi2g34650 No alias FASCICLIN-like arabinogalactan-protein 11 0.05 Orthogroups_2024-Update
Brara.C00098.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Glyma.03G180000 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Glyma.05G161900 No alias FASCICLIN-like arabinogalactan-protein 12 0.02 Orthogroups_2024-Update
Glyma.12G207600 No alias FASCICLIN-like arabinoogalactan 9 0.02 Orthogroups_2024-Update
LOC_Os01g06580 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g20560 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g07060 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g48900 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.001G320800 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.09 Orthogroups_2024-Update
Potri.015G129400 No alias FASCICLIN-like arabinogalactan-protein 11 0.09 Orthogroups_2024-Update
Potri.016G088700 No alias FASCICLIN-like arabinogalactan-protein 11 0.09 Orthogroups_2024-Update
Potri.019G121300 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Seita.3G146700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G146800.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Sobic.003G062000.1 No alias Fasciclin-type arabinogalactan protein 0.06 Orthogroups_2024-Update
Sobic.009G232100.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Sopen09g002530 No alias Fasciclin domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 64 172
No external refs found!